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A1 Pairwise diversity and tMRCA as potential markers of HIV infection recency

Sikhulile Moyo, Eduan Wilkinson, Alain Vandormael, Rui Wang, Jia Weng, Kenanao P Kotokwe, Simani Gaseitsiwe, Rosemary Musonda, Joseph Makhema, Max Essex, Susan Engelbrecht, Tulio de Oliveira and Vladimir Novitsky.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 173 words.

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A10 Using the molecular epidemiology of HIV transmission in New South Wales to inform public health response: Assessing the representativeness of linked phylogenetic data

Angie Pinto, Francesca Di Giallonardo, Phillip Keen, Craig Cooper, Barbara Telfer, David Cooper, Andrew Grulich and Anthony Kelleher.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 330 words.

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A11 The 1988 Elista outbreak and the epidemiology of HIV subtype G in Russia

Ekaterina Serova, Anastasia Murzakova, Marina Nossik, Andrey Shemshura, Georgii Bazykin and Dmitry Kireev.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 361 words.

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A12 Transmitted HLA pre-adapted polymorphisms in the GAG protein influences viral evolution in the new host

D Mónaco, D Dilernia, A Gartland, K Qin, K Dennis, J Tang, J Gilmour, A Bansal, S Allen, P Goepfert and E Hunter.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 354 words.

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A13 Social affects phylogeny: Exploration of ongoing and active transmission chains

M Siljic, V Cirkovic, S Lukovic, D Salemovic, I Pesic-Pavlovic, D J Jevtivic and M Stanojevic.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 369 words.

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A14 Ultra-wide and ultra-deep sequencing increases the detection rate of dual HIV-1 infections and recombinants

K Van Laethem, A Thielen, Y Schrooten, F Ferreira, L Vinken and M Daümer.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 359 words.

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A15 HIV-1 whole-genome NGS analysis to characterize virus evolution following dendritic cell immunotherapy and analytical treatment interruption

C Lungu, P H M Boers, C M E Schapendonk, S L Smits, D A M C van de Vijver and R A Gruters.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 297 words.

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A16 Primary drug resistance among children infected with HIV-1 in Mozambique: Impact of maternal and neonatal prophylaxis

Nália Ismael, Dulce Bila, Nedio Mabunda, Martina Penazzato and Adolfo Vubil.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 419 words.

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A17 Transmitted drug-resistant mutations among recently infected HIV-1 patients in Israel, 2000–2014

Roy Moscona, Daniela Ram, Marina Wax, Efrat Bucris, Itzchak Levy, Ella Mendelson and Orna Mor.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 310 words.

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A18 HIV-1 genetic diversity and drug resistance in Haiti

G Delva, M Charles and C Yang.

in Virus Evolution

P ublished online April 2018 .

Journal Article. Subjects: Public Health and Epidemiology; Epidemiology; Evolutionary Biology; Genetics and Genomics; Microbiology. 179 words.

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