Journal Article

<i>Arabidopsis thaliana</i> regulatory element analyzer

Ananyo Choudhury and Ansuman Lahiri

in Bioinformatics

Volume 24, issue 19, pages 2263-2264
Published in print October 2008 | ISSN: 1367-4803
Published online August 2008 | e-ISSN: 1460-2059 | DOI:
Arabidopsis thaliana regulatory element analyzer

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Summary: In the Arabidopsis thaliana regulatory element analyzer (AtREA) server, we have integrated sequence data, genome-wide expression data and functional annotation data in three application modules which will be useful to identify major regulatory targets of a user-provided cis-regulatory element (CRE), study different features of CRE distribution and evaluate the role of a set of CREs in the regulation of gene expression—independently as well as in combination with other user-provided CREs.

Availability: AtREA is freely available at


Journal Article.  1402 words. 

Subjects: Bioinformatics and Computational Biology

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