Journal Article

MS-BID: a Java package for label-free LC-MS-based comparative proteomic analysis

Daehee Hwang, Ning Zhang, Hookeun Lee, Eugene Yi, Hui Zhang, Inyoul Y. Lee, Leroy Hood and Ruedi Aebersold

in Bioinformatics

Volume 24, issue 22, pages 2641-2642
Published in print November 2008 | ISSN: 1367-4803
Published online September 2008 | e-ISSN: 1460-2059 | DOI: http://dx.doi.org/10.1093/bioinformatics/btn491
MS-BID: a Java package for label-free LC-MS-based comparative proteomic analysis

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Summary: MS-BID (MS Biomarker Discovery Platform) is an integrative computational pipeline for biomarker discovery using LC-MS-based comparative proteomic analysis. This platform consists of several computational tools for: (i) detecting peptides in the collected patterns; (ii) matching detected peptides across a number of LC-MS datasets and (iii) selecting discriminatory peptides between classes of samples.

Availability: MS-BID source codes, binaries and documentations are freely available under LGPL from http://tools.proteomecenter.org/msBID.php.

Contact: dhhwang@postech.ac.kr

Journal Article.  1280 words.  Illustrated.

Subjects: Bioinformatics and Computational Biology

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