Journal Article

POPE—a tool to aid high-throughput phylogenetic analysis

Thorhildur Juliusdottir, Fredrik Pettersson and Richard R. Copley

in Bioinformatics

Volume 24, issue 23, pages 2778-2779
Published in print December 2008 | ISSN: 1367-4803
Published online October 2008 | e-ISSN: 1460-2059 | DOI: http://dx.doi.org/10.1093/bioinformatics/btn533

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Summary: POPE (Phylogeny, Ortholog and Paralog Extractor) provides an integrated platform for automatic ortholog identification. Intermediate steps can be visualized, modified and analyzed in order to assess and improve the underlying quality of orthology and paralogy assignments.

Availability: POPE is available for download from the website: http://www.well.ox.ac.uk/~tota/pope.

Contact: tota@well.ox.ac.uk

Journal Article.  1399 words.  Illustrated.

Subjects: Bioinformatics and Computational Biology

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