Journal Article

MINOMICS: visualizing prokaryote transcriptomics and proteomics data in a genomic context

Rutger W. W. Brouwer, Sacha A. F. T. van Hijum and Oscar P. Kuipers

in Bioinformatics

Volume 25, issue 1, pages 139-140
Published in print January 2009 | ISSN: 1367-4803
Published online November 2008 | e-ISSN: 1460-2059 | DOI: http://dx.doi.org/10.1093/bioinformatics/btn588
MINOMICS: visualizing prokaryote transcriptomics and proteomics data in a genomic context

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Summary: We have developed MINOMICS, a tool that allows facile and in-depth visualization of prokaryotic transcriptomic and proteomic data in conjunction with genomics data. MINOMICS generates interactive linear genome maps in which multiple experimental datasets are displayed together with operon, regulatory motif, transcriptional promoter and transcriptional terminator information.

Availability: MINOMICS is freely accessible at http://www.minomics.nl

Contact: sacha.vanhijum@nizo.nl; o.p.kuipers@rug.nl

Supplementary information: http://bioinformatics.biol.rug.nl/supplementary/minomics/

Journal Article.  890 words.  Illustrated.

Subjects: Bioinformatics and Computational Biology

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