Journal Article

Systems biology metabolic modeling assistant: an ontology-based tool for the integration of metabolic data in kinetic modeling

Armando Reyes-Palomares, Raul Montañez, Alejando Real-Chicharro, Othmane Chniber, Amine Kerzazi, Ismael Navas-Delgado, Miguel Ángel Medina, José F. Aldana-Montes and Francisca Sánchez-Jiménez

in Bioinformatics

Volume 25, issue 6, pages 834-835
Published in print March 2009 | ISSN: 1367-4803
Published online February 2009 | e-ISSN: 1460-2059 | DOI: http://dx.doi.org/10.1093/bioinformatics/btp061
Systems biology metabolic modeling assistant: an ontology-based tool for the integration of metabolic data in kinetic modeling

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Summary: We present Systems Biology Metabolic Modeling Assistant (SBMM Assistant), a tool built using an ontology-based mediator, and designed to facilitate metabolic modeling through the integration of data from repositories that contain valuable metabolic information. This software can be used for the visualization, design and management of metabolic networks; selection, integration and storage of metabolic information; and as an assistant for kinetic modeling.

Availability: SBMM Assistant for academic use is freely available at http://www.sbmm.uma.es.

Contact: kika@uma.es

Journal Article.  1200 words. 

Subjects: Bioinformatics and Computational Biology

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