Journal Article

Synergy Disequilibrium Plots: graphical visualization of pairwise synergies and redundancies of SNPs with respect to a phenotype

John Watkinson and Dimitris Anastassiou

in Bioinformatics

Volume 25, issue 11, pages 1445-1446
Published in print June 2009 | ISSN: 1367-4803
Published online March 2009 | e-ISSN: 1460-2059 | DOI: http://dx.doi.org/10.1093/bioinformatics/btp159

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Summary:We present a visualization tool applied on genome-wide association data, revealing disease-associated haplotypes, epistatically interacting loci, as well as providing visual signatures of multivariate correlations of genetic markers with respect to a phenotype.

Availability:Freely available on the web at: http://www.ee.columbia.edu/~anastas/sdplots

Contact:anastas@ee.columbia.edu

Supplementary information: Supplementary data are available at Bioinformatics online.

Journal Article.  1242 words.  Illustrated.

Subjects: Bioinformatics and Computational Biology

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