Journal Article

Saint: a lightweight integration environment for model annotation

Allyson L. Lister, Matthew Pocock, Morgan Taschuk and Anil Wipat

in Bioinformatics

Volume 25, issue 22, pages 3026-3027
Published in print November 2009 | ISSN: 1367-4803
Published online September 2009 | e-ISSN: 1460-2059 | DOI: http://dx.doi.org/10.1093/bioinformatics/btp523

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Summary: Saint is a web application which provides a lightweight annotation integration environment for quantitative biological models. The system enables modellers to rapidly mark up models with biological information derived from a range of data sources.

Availability and Implementation: Saint is freely available for use on the web at http://www.cisban.ac.uk/saint. The web application is implemented in Google Web Toolkit and Tomcat, with all major browsers supported. The Java source code is freely available for download at http://saint-annotate.sourceforge.net. The Saint web server requires an installation of libSBML and has been tested on Linux (32-bit Ubuntu 8.10 and 9.04).

Contact: helpdesk@cisban.ac.uk; a.l.lister@ncl.ac.uk

Supplementary information: Supplementary data are available at Bioinformatics online.

Journal Article.  1406 words. 

Subjects: Bioinformatics and Computational Biology

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