Journal Article

CellClassifier: supervised learning of cellular phenotypes

Pauli Rämö, Raphael Sacher, Berend Snijder, Boris Begemann and Lucas Pelkmans

in Bioinformatics

Volume 25, issue 22, pages 3028-3030
Published in print November 2009 | ISSN: 1367-4803
Published online September 2009 | e-ISSN: 1460-2059 | DOI: https://dx.doi.org/10.1093/bioinformatics/btp524
CellClassifier: supervised learning of cellular phenotypes

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Summary:CellClassifier is a tool for classifying single-cell phenotypes in microscope images. It includes several unique and user-friendly features for classification using multiclass support vector machines

Availability: Source code, user manual and SaveObjectSegmentation CellProfiler module available for download at www.cellclassifier.ethz.ch under the GPL license (implemented in Matlab).

Contact: pelkmans@imsb.biol.ethz.ch

Supplementary information: Supplementary data are available at Bioinformatics online.

Journal Article.  1399 words.  Illustrated.

Subjects: Bioinformatics and Computational Biology

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