Journal Article

NGSView: an extensible open source editor for next-generation sequencing data

Erik Arner, Yoshihide Hayashizaki and Carsten O. Daub

in Bioinformatics

Volume 26, issue 1, pages 125-126
Published in print January 2010 | ISSN: 1367-4803
Published online October 2009 | e-ISSN: 1460-2059 | DOI: http://dx.doi.org/10.1093/bioinformatics/btp611

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Summary:High-throughput sequencing technologies introduce novel demands on tools available for data analysis. We have developed NGSView (Next Generation Sequence View), a generally applicable, flexible and extensible next-generation sequence alignment editor. The software allows for visualization and manipulation of millions of sequences simultaneously on a desktop computer, through a graphical interface. NGSView is available under an open source license and can be extended through a well documented API.

Availability: http://ngsview.sourceforge.net

Contact: arner@gsc.riken.jp

Journal Article.  1474 words. 

Subjects: Bioinformatics and Computational Biology

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