Journal Article

MATICCE: mapping transitions in continuous character evolution

Andrew L. Hipp and Marcial Escudero

in Bioinformatics

Volume 26, issue 1, pages 132-133
Published in print January 2010 | ISSN: 1367-4803
Published online October 2009 | e-ISSN: 1460-2059 | DOI: http://dx.doi.org/10.1093/bioinformatics/btp625
MATICCE: mapping transitions in continuous character evolution

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Summary: MATICCE is a new software package in the R language for mapping phylogenetic transitions in organismal traits that have continuous distributions. MATICCE integrates over phylogenetic and model uncertainty and provides simulation functions for visualizing evolutionary scenarios based on estimated parameter values.

Availability and Implementation: MATICCE is written in the open source R language and freely available through the Comprehensive R Archive Network (http://cran.r-project.org/web/packages/maticce).

Contact: ahipp@mortonarb.org

Journal Article.  1319 words.  Illustrated.

Subjects: Bioinformatics and Computational Biology

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