Journal Article

hPDI: a database of experimental human protein–DNA interactions

Zhi Xie, Shaohui Hu, Seth Blackshaw, Heng Zhu and Jiang Qian

in Bioinformatics

Volume 26, issue 2, pages 287-289
Published in print January 2010 | ISSN: 1367-4803
Published online November 2009 | e-ISSN: 1460-2059 | DOI:
hPDI: a database of experimental human protein–DNA interactions

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Summary: The human protein DNA Interactome (hPDI) database holds experimental protein–DNA interaction data for humans identified by protein microarray assays. The unique characteristics of hPDI are that it contains consensus DNA-binding sequences not only for nearly 500 human transcription factors but also for >500 unconventional DNA-binding proteins, which are completely uncharacterized previously. Users can browse, search and download a subset or the entire data via a web interface. This database is freely accessible for any academic purposes.



Journal Article.  1350 words. 

Subjects: Bioinformatics and Computational Biology

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