Journal Article

dbTEU: a protein database of trace element utilization

Yan Zhang and Vadim N. Gladyshev

in Bioinformatics

Volume 26, issue 5, pages 700-702
Published in print March 2010 | ISSN: 1367-4803
Published online January 2010 | e-ISSN: 1460-2059 | DOI: http://dx.doi.org/10.1093/bioinformatics/btp705
dbTEU: a protein database of trace element utilization

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Summary: Biological trace elements are required for numerous biological processes and by all organisms. We describe a database, dbTEU (DataBase of Trace Element Utilization), that features known transporters and user proteins for five trace elements (copper, molybdenum, nickel, cobalt and selenium) and represents sequenced organisms from the three domains of life. The manually curated dbTEU currently includes ∼16 500 proteins from >700 organisms, and offers interactive trace element, protein, organism and sequence search and browse tools.

Availability and Implementation: dbTEU is freely available at http://gladyshevlab.bwh.harvard.edu/trace_element/

Contact: vgladyshev@rics.bwh.harvard.edu

Journal Article.  1566 words.  Illustrated.

Subjects: Bioinformatics and Computational Biology

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