Journal Article

VirusMentha: a new resource for virus-host protein interactions

Alberto Calderone, Luana Licata and Gianni Cesareni

in Nucleic Acids Research

Volume 43, issue D1, pages D588-D592
Published in print January 2015 | ISSN: 0305-1048
Published online September 2014 | e-ISSN: 1362-4962 | DOI: https://dx.doi.org/10.1093/nar/gku830

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Viral infections often cause diseases by perturbing several cellular processes in the infected host. Viral proteins target host proteins and either form new complexes or modulate the formation of functional host complexes. Describing and understanding the perturbation of the host interactome following viral infection is essential for basic virology and for the development of antiviral therapies. In order to provide a general overview of such interactions, a few years ago we developed VirusMINT. We have now extended the scope and coverage of VirusMINT and established VirusMentha, a new virus–virus and virus–host interaction resource build on the detailed curation protocols of the IMEx consortium and on the integration strategies developed for mentha. VirusMentha is regularly and automatically updated every week by capturing, via the PSICQUIC protocol, interactions curated by five different databases that are part of the IMEx consortium. VirusMentha can be freely browsed at http://virusmentha.uniroma2.it/ and its complete data set is available for download.

Journal Article.  2432 words.  Illustrated.

Subjects: Chemistry ; Biochemistry ; Bioinformatics and Computational Biology ; Genetics and Genomics ; Molecular and Cell Biology

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