chloroplast DNA (chDNA)
Inferring direct DNA binding from ChIP-seq
MEME-ChIP: motif analysis of large DNA datasets
DNA binding and transcription activation by chicken interferon regulatory factor-3 (chIRF-3)
The role of CH/π interactions implicated in the sequence-dependent deformability of DNA
Sensitive and accurate identification of protein–DNA binding events in ChIP-chip assays using higher order derivative analysis
MuMoD: a Bayesian approach to detect multiple modes of protein–DNA binding from genome-wide ChIP data
The chAB4 and NF1-related long-range multisequence DNA families are contiguous in the centromeric heterochromatin of several human chromosomes
A ChIP–chip approach reveals a novel role for transcription factor IRF1 in the DNA damage response
Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIP-sequencing
Impact of different ChIP-Seq protocols on DNA integrity and quality of bioinformatics analysis results
Distribution of Stable DnaA-Binding Sites on the Bacillus Subtilis Genome Detected using a Modified ChIP-chip Method
Z-DNA-forming sites identified by ChIP-Seq are associated with actively transcribed regions in the human genome
piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing
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