Journal Article

plprot: A Comprehensive Proteome Database for Different Plastid Types

Torsten Kleffmann, Matthias Hirsch-Hoffmann, Wilhelm Gruissem and Sacha Baginsky

in Plant and Cell Physiology

Published on behalf of Japanese Society of Plant Physiologists

Volume 47, issue 3, pages 432-436
Published in print March 2006 | ISSN: 0032-0781
Published online March 2006 | e-ISSN: 1471-9053 | DOI: http://dx.doi.org/10.1093/pcp/pcj005
plprot: A Comprehensive Proteome Database for Different Plastid Types

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  • Biochemistry
  • Molecular and Cell Biology
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Different plant plastid types contain a distinct protein complement for specialized functions and metabolic activities. plprot was established as a plastid proteome database to provide information about the proteomes of chloroplasts, etioplasts and undifferentiated plastids. The current version of plprot features 2,043 protein entries and consists of two modules. Module one contains a BLAST search option and provides comparative information on the proteomes of different plastid types. The second module contains four searchable databases, three for each individual plastid type and one comprehensive composite database that provides the results of plastid proteome analyses from different laboratories. plprot is accessible at http://www.plprot.ethz.ch.

Keywords: Plastid differentiation; Protein database; Proteomics; MS, mass spectrometry

Journal Article.  2735 words.  Illustrated.

Subjects: Biochemistry ; Molecular and Cell Biology ; Plant Sciences and Forestry

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