Oxford Index Search Results

You are looking at 41-60 of 1,283 items for:

community x Molecular and Cell Biology x clear all

Drivers of yeast community composition in the litter and soil of a temperate forest

Tereza Mašínová, Barbara Doreen Bahnmann, Tomáš Větrovský, Michal Tomšovský, Kristina Merunková and Petr Baldrian.

in FEMS Microbiology Ecology

P ublished online October 2016 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 7665 words.

Abstract

Fungi represent a group of soil microorganisms fulfilling important ecological functions. Although several studies have shown that yeasts represent a...

Go to »  full text: open access

The vaginal bacterial communities of Japanese women resemble those of women in other racial groups

Xia Zhou, Melanie A. Hansmann, Catherine C. Davis, Haruo Suzuki, Celeste J. Brown, Ursel Schütte, Jacob D. Pierson and Larry J. Forney.

in FEMS Immunology & Medical Microbiology

March 2010; p ublished online February 2010 .

Journal Article. Subjects: Medical Microbiology and Virology; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 5696 words.

Abstract

To determine whether different racial groups shared common types of vaginal microbiota, we characterized the composition and structure of vaginal...

Characterization of bacterial communities in lithobionts and soil niches from Victoria Valley, Antarctica

Marc W. Van Goethem, Thulani P. Makhalanyane, Angel Valverde, Stephen C. Cary and Don A. Cowan.

Edited by Dirk Wagner.

in FEMS Microbiology Ecology

April 2016; p ublished online March 2016 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 5746 words.

Graphical Abstract Figure.

Characterization of general bacterial and cyanobacterial populations from soil and lithibiontic microbial communities (hypoliths and endoliths) of Victoria...

Go to »  full text: open access

Bacteria–phage coevolution as a driver of ecological and evolutionary processes in microbial communities

Britt Koskella and Michael A. Brockhurst.

in FEMS Microbiology Reviews

September 2014; p ublished online September 2014 .

Journal Article. Subjects: Medical Microbiology and Virology; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 11699 words.

Empirical evidence for bacteria-phage coevolution from both laboratory and natural populations suggests that coevolution is a key driver of ecological and evolutionary processes in...

Go to »  full text: open access

A salamander's top down effect on fungal communities in a detritivore ecosystem

Donald M Walker, Christopher M Murray, Doug Talbert, Paul Tinker, Sean P Graham and Thomas W Crowther.

in FEMS Microbiology Ecology

P ublished online September 2018 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 5906 words.

ABSTRACT

The soil decomposer community is a primary driver of carbon cycling in forest ecosystems. Understanding the processes that structure this community is...

Go to »  full text: open access

Early colonizers of unoccupied habitats represent a minority of the soil bacterial community

Alexandra B. Wolf, Max-Bernhard Rudnick, Wietse de Boer and George A. Kowalchuk.

Edited by Ian C. Anderson.

in FEMS Microbiology Ecology

May 2015; p ublished online March 2015 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 6131 words.

Graphical Abstract Figure.

Using a microcosm design and high-throughput sequencing, it was demonstrated that only a small minority of the total soil bacterial community can successfully...

Go to »  full text: open access

Linking fungal communities to wood density loss after 12 years of log decay

Ariana Kubartová, Elisabet Ottosson and Jan Stenlid.

Edited by Ian C Anderson.

in FEMS Microbiology Ecology

May 2015; p ublished online March 2015 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 7242 words.

Graphical Abstract Figure.

The manuscript documents importance of fungal communities, as the major wood decomposers, in dead-wood decay, which should be taken into account when modeling...

Go to »  full text: open access

Functional responses and adaptation of mesophilic microbial communities to psychrophilic anaerobic digestion

Eoin Gunnigle, Jeppe L. Nielsen, Matthew Fuszard, Catherine H. Botting, Jerome Sheahan, Vincent O'Flaherty and Florence Abram.

Edited by Alfons Stams.

in FEMS Microbiology Ecology

December 2015; p ublished online October 2015 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 8837 words.

Graphical Abstract Figure.

This study investigated microbial consortia driving the anaerobic digestion of wastewater and highlighted community dynamics associated with functional shifts as...

Go to »  full text: open access

Response of the protistan community of a rice field soil to different oxygen tensions

Yuriko Takenouchi, Kazufumi Iwasaki and Jun Murase.

Edited by Tillmann Lueders.

in FEMS Microbiology Ecology

July 2016; p ublished online May 2016 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 5399 words.

Graphical Abstract Figure.

Amoeba and flagellates in a rice field soil adapt to a wide range of oxygen tensions down to below the Pasteur point with a shift in community structure.

null...

Go to »  full text: open access

Strong linkage between plant and soil fungal communities along a successional coastal dune system

Alice Roy-Bolduc, Etienne Laliberté, Stéphane Boudreau and Mohamed Hijri.

Edited by Ian Anderson.

in FEMS Microbiology Ecology

October 2016; p ublished online July 2016 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 6802 words.

Graphical Abstract Figure.

Strong correlation between vegetation and soil fungal communities, similar responses to soil properties, and increasing diversity of plant nutrient-acquisition...

Go to »  full text: open access

Effect of spatial origin and hydrocarbon composition on bacterial consortia community structure and hydrocarbon biodegradation rates

Lloyd D Potts, Luis J Perez Calderon, Evangelia Gontikaki, Lehanne Keith, Cécile Gubry-Rangin, James A Anderson and Ursula Witte.

in FEMS Microbiology Ecology

P ublished online June 2018 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 8465 words.

Abstract

Oil reserves in deep-sea sediments are currently subject to intense exploration, with associated risks of oil spills. Previous research suggests that...

Go to »  full text: open access

Prolonged exposure does not increase soil microbial community compositional response to warming along geothermal gradients

Dajana Radujković, Erik Verbruggen, Bjarni D Sigurdsson, Niki I W Leblans, Ivan A Janssens, Sara Vicca and James T Weedon.

in FEMS Microbiology Ecology

P ublished online December 2017 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 7873 words.

Abstract

Global change is expected to affect soil microbial communities through their responsiveness to temperature. It has been proposed that prolonged...

Go to »  full text: open access

RiceWiki: a wiki-based database for community curation of rice genes

Zhang Zhang, Jian Sang, Lina Ma, Gang Wu, Hao Wu, Dawei Huang, Dong Zou, Siqi Liu, Ang Li, Lili Hao, Ming Tian, Chao Xu, Xumin Wang, Jiayan Wu, Jingfa Xiao, Lin Dai, Ling-Ling Chen, Songnian Hu and Jun Yu.

in Nucleic Acids Research

January 2014; p ublished online October 2013 .

Journal Article. Subjects: Chemistry; Biochemistry; Bioinformatics and Computational Biology; Genetics and Genomics; Molecular and Cell Biology. 3570 words.

Rice is the most important staple food for a large part of the world’s human population and also a key model organism for biological studies of crops as well as other related plants. Here...

Go to »  full text: open access

Community Environmental Factors Are Associated With Disability in Older Adults With Functional Limitations: The MOST Study

Julie J. Keysor, Alan M. Jette, Michael P. LaValley, Cora E. Lewis, James C. Torner, Michael C. Nevitt and Dave T. Felson.

in The Journals of Gerontology: Series A

April 2010; p ublished online December 2009 .

Journal Article. Subjects: Geriatric Medicine; Public Health; Biological Sciences; Molecular and Cell Biology; Neuroscience. 4720 words.

Background

There is limited evidence supporting the hypothesized environment–disability link. The objectives of this study were to (a) identify the...

Bacterial and fungal communities in boreal forest soil are insensitive to changes in snow cover conditions

Minna Männistö, Jaana Vuosku, Sari Stark, Karita Saravesi, Marko Suokas, Annamari Markkola, Françoise Martz and Pasi Rautio.

in FEMS Microbiology Ecology

P ublished online June 2018 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 9688 words.

ABSTRACT

The northern regions are experiencing considerable changes in winter climate leading to more frequent warm periods, rain-on-snow events and reduced...

Go to »  full text: open access

The BioMart community portal: an innovative alternative to large, centralized data repositories

Damian Smedley, Syed Haider, Steffen Durinck, Luca Pandini, Paolo Provero, James Allen, Olivier Arnaiz, Mohammad Hamza Awedh, Richard Baldock, Giulia Barbiera, Philippe Bardou, Tim Beck, Andrew Blake, Merideth Bonierbale, Anthony J. Brookes, Gabriele Bucci, Iwan Buetti, Sarah Burge, Cédric Cabau, Joseph W. Carlson, Claude Chelala, Charalambos Chrysostomou, Davide Cittaro, Olivier Collin, Raul Cordova, Rosalind J. Cutts, Erik Dassi, Alex Di Genova, Anis Djari, Anthony Esposito, Heather Estrella, Eduardo Eyras, Julio Fernandez-Banet, Simon Forbes, Robert C. Free, Takatomo Fujisawa, Emanuela Gadaleta, Jose M. Garcia-Manteiga, David Goodstein, Kristian Gray, José Afonso Guerra-Assunção, Bernard Haggarty, Dong-Jin Han, Byung Woo Han, Todd Harris, Jayson Harshbarger, Robert K. Hastings, Richard D. Hayes, Claire Hoede, Shen Hu, Zhi-Liang Hu, Lucie Hutchins, Zhengyan Kan, Hideya Kawaji, Aminah Keliet, Arnaud Kerhornou, Sunghoon Kim, Rhoda Kinsella, Christophe Klopp, Lei Kong, Daniel Lawson, Dejan Lazarevic, Ji-Hyun Lee, Thomas Letellier, Chuan-Yun Li, Pietro Lio, Chu-Jun Liu, Jie Luo, Alejandro Maass, Jerome Mariette, Thomas Maurel, Stefania Merella, Azza Mostafa Mohamed, Francois Moreews, Ibounyamine Nabihoudine, Nelson Ndegwa, Céline Noirot, Cristian Perez-Llamas, Michael Primig, Alessandro Quattrone, Hadi Quesneville, Davide Rambaldi, James Reecy, Michela Riba, Steven Rosanoff, Amna Ali Saddiq, Elisa Salas, Olivier Sallou, Rebecca Shepherd, Reinhard Simon, Linda Sperling, William Spooner, Daniel M. Staines, Delphine Steinbach, Kevin Stone, Elia Stupka, Jon W. Teague, Abu Z. Dayem Ullah, Jun Wang, Doreen Ware, Marie Wong-Erasmus, Ken Youens-Clark, Amonida Zadissa, Shi-Jian Zhang and Arek Kasprzyk.

in Nucleic Acids Research

July 2015; p ublished online April 2015 .

Journal Article. Subjects: Chemistry; Biochemistry; Bioinformatics and Computational Biology; Genetics and Genomics; Molecular and Cell Biology. 4395 words.

The BioMart Community Portal (www.biomart.org) is a community-driven effort to provide a unified interface to biomedical databases that are distributed worldwide. The portal provides access...

Go to »  full text: open access

LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs

Lina Ma, Ang Li, Dong Zou, Xingjian Xu, Lin Xia, Jun Yu, Vladimir B. Bajic and Zhang Zhang.

in Nucleic Acids Research

January 2015; p ublished online November 2014 .

Journal Article. Subjects: Chemistry; Biochemistry; Bioinformatics and Computational Biology; Genetics and Genomics; Molecular and Cell Biology. 3523 words.

Long non-coding RNAs (lncRNAs) perform a diversity of functions in numerous important biological processes and are implicated in many human diseases. In this report we present lncRNAWiki...

Go to »  full text: open access

Identifying the key taxonomic categories that characterize microbial community diversity using full-scale classification: a case study of microbial communities in the sediments of Hangzhou Bay

Tianjiao Dai, Yan Zhang, Yushi Tang, Yaohui Bai, Yile Tao, Bei Huang and Donghui Wen.

Edited by Gary King.

in FEMS Microbiology Ecology

October 2016; p ublished online July 2016 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 5957 words.

Graphical Abstract Figure.

Based on a full-scale microbial taxa classification, the roles and contributions of key taxonomic categories in maintaining and altering microbial community...

Go to »  full text: open access

Enteropathogens associated with acute diarrhea in community and hospital patients in Jakarta, Indonesia

Buhari A. Oyofo, Decy Subekti, Periska Tjaniadi, Nunung Machpud, S. Komalarini, B. Setiawan, C. Simanjuntak, Narain Punjabi, Andrew L. Corwin, Momtaz Wasfy, James R. Campbell and Murad Lesmana.

in FEMS Immunology & Medical Microbiology

October 2002; p ublished online January 2006 .

Journal Article. Subjects: Medical Microbiology and Virology; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 5196 words.

Abstract

The prevalence of bacteria, parasite and viral pathogens in 3875 patients with diarrhea in community and hospital settings from March 1997 through...

Differences in planktonic microbial communities associated with three types of macrophyte stands in a shallow lake

Anikó Mentes, Attila Szabó, Boglárka Somogyi, Balázs Vajna, Nóra Tugyi, Bianka Csitári, Lajos Vörös and Tamás Felföldi.

in FEMS Microbiology Ecology

P ublished online November 2017 .

Journal Article. Subjects: Soil Science; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 7275 words.

Abstract

Little is known about how various substances from living and decomposing aquatic macrophytes affect the horizontal patterns of planktonic bacterial...

Go to »  full text: open access