Oxford Index Search Results

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Cricket x Bioinformatics and Computational Biology x clear all

Hammerhead-mediated processing of satellite pDo500 family transcripts from Dolichopoda cave crickets

Andres A. Rojas, Alejandro Vazquez-Tello, Gerardo Ferbeyre, Federica Venanzetti, Lutz Bachmann, Bruno Paquin, Valerio Sbordoni and Robert Cedergren.

in Nucleic Acids Research

October 2000; p ublished online October 2000 .

Journal Article. Subjects: Chemistry; Biochemistry; Bioinformatics and Computational Biology; Genetics and Genomics; Molecular and Cell Biology. 4292 words.

This work reports the discovery and functional characterization of catalytically active hammerhead motifs within satellite DNA of the pDo500 family from several Dolichopoda cave cricket...

Enhancing a Pathway-Genome Database (PGDB) to capture subcellular localization of metabolites and enzymes: the nucleotide-sugar biosynthetic pathways of Populus trichocarpa

Ambarish Nag, Tatiana V. Karpinets, Christopher H. Chang and Maor Bar-Peled.

in Database

P ublished online March 2012 .

Journal Article. Subjects: Bioinformatics and Computational Biology; Ecology and Conservation; Evolutionary Biology. 8261 words.

Understanding how cellular metabolism works and is regulated requires that the underlying biochemical pathways be adequately represented and integrated with large metabolomic data sets to...

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ASGARD: an open-access database of annotated transcriptomes for emerging model arthropod species

Victor Zeng and Cassandra G. Extavour.

in Database

P ublished online November 2012 .

Journal Article. Subjects: Bioinformatics and Computational Biology; Ecology and Conservation; Evolutionary Biology. 7778 words.

The increased throughput and decreased cost of next-generation sequencing (NGS) have shifted the bottleneck genomic research from sequencing to annotation, analysis and accessibility. This...

Go to »  full text: open access   » abstract

DDBJ with new system and face

H. Sugawara, O. Ogasawara, K. Okubo, T. Gojobori and Y. Tateno.

in Nucleic Acids Research

January 2008; p ublished online October 2007 .

Journal Article. Subjects: Chemistry; Biochemistry; Bioinformatics and Computational Biology; Genetics and Genomics; Molecular and Cell Biology. 1717 words.

DDBJ (http://www.ddbj.nig.ac.jp) collected and released 1 880 115 entries or 1 134 086 245 bases in the period from July 2006 to June 2007. The released data contains the high-throughput...

Efficient trans-cleavage by the Schistosoma mansoni SMα1 hammerhead ribozyme in the extreme thermophile Thermus thermophilus

Alejandro Vazquez-Tello, Pablo Castán, Renata Moreno, James M. Smith, José Berenguer and Robert Cedergren.

in Nucleic Acids Research

April 2002; p ublished online April 2002 .

Journal Article. Subjects: Chemistry; Biochemistry; Bioinformatics and Computational Biology; Genetics and Genomics; Molecular and Cell Biology. 5539 words.

The catalytic hammerhead structure has been found in association with repetitive DNA from several animals, including salamanders, crickets and schistosomes, and functions to process in cis t...