Oxford Index Search Results

You are looking at 1-20 of 46 items for:

DNA fingerprint x Microbiology x clear all

DNA fingerprint

Overview page. Subjects: Ecology and Conservation.

A set of DNA-based characters which are in a combination unique, or nearly so, to an individual organism. See also satellite DNA.

See overview in Oxford Index

DNA Fingerprint Changes in Tuberculosis: Reinfection, Evolution, or Laboratory Error?

Judith R. Glynn, Amelia C. Crampin, Bagrey M. Ngwira, Frank D. Mwaungulu, Gillian F. Black, Steven D. Chaguluka, Donex T. Mwafulirwa, Sian Floyd, Caroline Murphy, Francis A. Drobniewski and Paul E. M. Fine.

in The Journal of Infectious Diseases

September 2004; p ublished online September 2004 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 5458 words.

Background . DNA fingerprint patterns of Mycobacterium tuberculosis strains vary within individuals and between epidemiologically linked individuals...

Go to »  abstract

Evaluation and comparison of random amplification of polymorphic DNA, pulsed-field gel electrophoresis and ADSRRS-fingerprinting for typing Serratia marcescens outbreaks

Beata Krawczyk, Łukasz Naumiuk, Krzysztof Lewandowski, Anna Baraniak, Marek Gniadkowski, Alfred Samet and Józef Kur.

in FEMS Immunology & Medical Microbiology

October 2003; p ublished online January 2006 .

Journal Article. Subjects: Medical Microbiology and Virology; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 4326 words.

Abstract

Amplification of DNA fragments surrounding rare restriction sites (ADSRRS-fingerprinting) is a novel assay based on suppression of polymerase chain...

Retrospective Detection of Laboratory Cross-Contamination of Mycobacterium tuberculosis Cultures with Use of DNA Fingerprint Analysis

Christopher R. Braden, Gary L. Templeton, William W. Stead, Joseph H. Bates, M. Donald Cave and Sarah E. Valway.

in Clinical Infectious Diseases

January 1997; p ublished online January 1997 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 0 words.

In 1992–1993, we investigated possible cross-contamination of Mycobacterium tuberculosis cultures as part of a study of tuberculosis in Arkansas by using DNA fingerprint...

Go to »  abstract

A Clinical and Bacteriologic Investigation of Invasive Streptococcal Infections in Japan on the Basis of Serotypes, Toxin Production, and Genomic DNA Fingerprints

Kazumitsu Nakashima, Satoshi Ichiyama, Yoshitsugu Iinuma, Yoshinori Hasegawa, Michio Ohta, Kenji Ooe, Yoshikata Shimizu, Hideo Igarashi, Teiko Murai and Kaoru Shimokata.

in Clinical Infectious Diseases

August 1997; p ublished online August 1997 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 0 words.

In a survey of invasive streptococcal infections in Japan, we analyzed isolates of Streptococcus pyogenes collected between 1992 and 1994. Genomic DNA fingerprints produced by pulsed-field...

Go to »  abstract

Studying Transmission of Tuberculosis with Use of DNA Fingerprinting

R. F. C. Doveren and S. T. Keizer.

in Clinical Infectious Diseases

August 1998; p ublished online August 1998 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 0 words.

Go to »  abstract

Phenotypic and Genotypic Characteristics of Clinical Isolates of Pseudomonas aeruginosa: Rate of Occurrence and Distribution of Different Serotypes, Antimicrobial Susceptibility Profiles, and Molecular Typing

Roudabeh J. Jamasbi and Eric M. Proudfoot.

in Laboratory Medicine

March 2008; p ublished online September 2015 .

Journal Article. Subjects: Medical Microbiology and Virology; Microbiology. 0 words.

Background

In the current investigation, 167 clinical isolates of Pseudomonas aeruginosa obtained from a Northwest Ohio hospital were tested for phenotypic...

Use of Polymerase Chain Reaction Fingerprinting to Compare Clinical Isolates of Bacteroides fragilis and Bacteroides thetaiotaomicron from Germany and the United States

M. C. Claros, S. Hunt Gerardo, D. M. Citron, E. J. C. Goldstein, G. Schönian and A. C. Rodloff.

in Clinical Infectious Diseases

September 1997; p ublished online September 1997 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 0 words.

Accurate identification of Bacteroides species is often problematic. Therefore, we used a polymerase chain reaction (PCR) fingerprinting technique with either a single nonspecific primer...

Go to »  abstract

Characterization of Indole-Negative Bacteroides fragilis Group Species with Use of Polymerase Chain Reaction Fingerprinting and Resistance Profiles

M. C. Claros, D. M. Citron, S. Hunt Gerardo, E. J. C. Goldstein, G. Schönian, T. Montag, B. Hampel and A. C. Rodloff.

in Clinical Infectious Diseases

December 1996; p ublished online December 1996 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 0 words.

Biochemical tests alone do not adequately differentiate the various Bacteroides species, groups, and antimicrobial-resistant variants. Consequently, we used a polymerase chain reaction...

Go to »  abstract

Outbreak of Tuberculosis Among Homeless Persons Coinfected with Human Immunodeficiency Virus

Peter D. McElroy, Southwick Karen L., Ellen R. Fortenberry, Elizabeth C. Levine, Lois A. Diem, Charles L. Woodley, Paula M. Williams, Kimberly D. McCarthy, Renée Ridzon and Peter A. Leone.

in Clinical Infectious Diseases

May 2003; p ublished online May 2003 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 4670 words.

We investigated a cluster of patients with tuberculosis (TB) in North Carolina and determined the extent of transmission of 1 strain of Mycobacterium tuberculosis. A retrospective cohort...

Go to »  abstract

Differences in Histoplasmosis in Patients with Acquired Immunodeficiency Syndrome in the United States and Brazil

Kian Karimi, L. Joseph Wheat, Patricia Connolly, Gretchen Cloud, Rana Hajjeh, Emerson Wheat, Katia Alves, Carlos da Silva Lacaz and Elizabeth Keath.

in The Journal of Infectious Diseases

December 2002; p ublished online December 2002 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 3233 words.

Demographic and clinical parameters among patients with acquired immunodeficiency syndrome and histoplasmosis in Brazil and United States were compared. The Brazilian isolates were typed by...

Go to »  abstract

Reactivation of 2 Genetically Distinct Varicella-Zoster Viruses in the Same Individual

Y. Taha, F. T. Scott, S. P. Parker, D. Syndercombe Court, M. L. Quinlivan and J. Breuer.

in Clinical Infectious Diseases

November 2006; p ublished online November 2006 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 1842 words.

Varicella-zoster viruses recovered from 2 episodes of herpes zoster in an immunocompetent man were found to be different genotypes. The fact that the 2 isolates came from the same...

Go to »  abstract

Occurrence of Resistance Mutation and Clonal Expansion in Helicobacter pylori Multiple-Strain Infection: A Potential Risk in Clarithromycin-Based Therapy

Helena Enroth, Britta Björkholm and Lars Engstrand.

in Clinical Infectious Diseases

June 1999; p ublished online June 1999 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 0 words.

In a previous study, a patient was shown by means of DNA fingerprinting to be infected with different Helicobacter pylori strains before and after clarithromycin treatment. The strain...

Go to »  abstract

Distribution of Genital Lactobacillus Strains Shared by Female Sex Partners

Jeanne M. Marrazzo, May Antonio, Kathy Agnew and Sharon L. Hillier.

in The Journal of Infectious Diseases

March 2009; p ublished online March 2009 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 2720 words.

The prevalence of bacterial vaginosis among lesbians is high. We assessed whether unique Lactobacillus strains were shared by female sex partners. Cultures of vaginal and rectal specimens...

The Temporal Dynamics of Relapse and Reinfection Tuberculosis After Successful Treatment: A Retrospective Cohort Study

Florian M. Marx, Rory Dunbar, Donald A. Enarson, Brian G. Williams, Robin M. Warren, Gian D. van der Spuy, Paul D. van Helden and Nulda Beyers.

in Clinical Infectious Diseases

June 2014; p ublished online March 2014 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 4525 words.

Background.  There is increasing evidence from tuberculosis high-burden settings that exogenous reinfection contributes considerably to recurrent...

Go to »  abstract

Serological and molecular characterization of leptospira serovar Kenya from captive African giant pouched rats (Cricetomys gambianus) from Morogoro Tanzania

R.S. Machang'u, G.F. Mgode, J. Assenga, G. Mhamphi, B. Weetjens, C. Cox, R. Verhagen, S. Sondij, M.G. Goris and R.A. Hartskeerl.

in FEMS Immunology & Medical Microbiology

June 2004; p ublished online January 2006 .

Journal Article. Subjects: Medical Microbiology and Virology; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 2560 words.

Abstract

Two identical leptospiral isolates coded Sh9 and Sh25 obtained from the urine of captive African giant pouched rats (Cricetomys gambianus), destined...

Development of neutralising human recombinant antibodies to pertussis toxin

Peter Williamson and Ruth Matthews.

in FEMS Immunology & Medical Microbiology

April 1999; p ublished online January 2006 .

Journal Article. Subjects: Medical Microbiology and Virology; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 3480 words.

Abstract

A phage antibody display library of single chain Fv (scFv) was derived from the peripheral blood of two patients recently recovered from pertussis...

Survival of Patients with Pulmonary Tuberculosis: Clinical and Molecular Epidemiologic Factors

Kris K. Oursler, Richard D. Moore, William R. Bishai, Susan M. Harrington, Diana S. Pope and Richard E. Chaisson.

in Clinical Infectious Diseases

March 2002; p ublished online March 2002 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 4565 words.

Using restriction fragment–length polymorphism data, we conducted a retrospective cohort study of 139 adult patients with pulmonary tuberculosis to investigate the clinical impact of Mycoba...

Go to »  abstract

Hospital Outbreak of Carbapenem-Resistant Pseudomonas aeruginosa Producing VIM-1, a Novel Transferable Metallo-β-Lactamase

Giuseppe Cornaglia, Annarita Mazzariol, Laura Lauretti, Gian Maria Rossolini and Roberta Fontana.

in Clinical Infectious Diseases

November 2000; p ublished online November 2000 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 4783 words.

A total of 8 Pseudomonas aeruginosa isolates was collected from 7 different patients in different wards of the University Hospital of Verona, Italy, from February 1997 to February 1998. The...

Go to »  abstract

Helicobacter pylori Populations in Peruvian Patients

Douglas E. Berg, Robert H. Gilman, Kalpana Srivastava, Yanet Valdez, Jose Watanabe, Juan Miyagi, Natalia S. Akopyants, Alberto Ramirez-Ramos, Tacano H. Yoshiwara, Sixto Recavarren and Raul Leon-Barua.

in Clinical Infectious Diseases

November 1997; p ublished online November 1997 .

Journal Article. Subjects: Infectious Diseases; Immunology; Public Health and Epidemiology; Microbiology. 0 words.

Helicobacter pylori is an extremely diverse species. The characterization of strains isolated from individual patients should give insights into colonization and disease...

Go to »  abstract

Ecology and evolution of bacterial microdiversity

Michael Schloter, Michael Lebuhn, Thierry Heulin and Anton Hartmann.

in FEMS Microbiology Reviews

December 2000; p ublished online January 2006 .

Journal Article. Subjects: Medical Microbiology and Virology; Biotechnology; Genetics and Genomics; Microbiology; Molecular and Cell Biology. 10237 words.

Abstract

Using high resolution molecular fingerprinting techniques like random amplification of polymorphic DNA, repetitive extragenic palindromic PCR and...

Go to »  full text: open access