Oxford Index Search Results

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community

Overview page. Subjects: Social Sciences — Arts and Humanities.

Many sociological and anthropological definitions exist, but most tend to privilege some combination of small-scale, relative boundedness, strong affective ties, traditionalism, and...

See overview in Oxford Index

Comparative transcriptomics of cyprinid minnows and carp in a common wild setting: a resource for ecological genomics in freshwater communities

Trevor J Krabbenhoft and Thomas F Turner.

in DNA Research

February 2018; p ublished online September 2017 .

Journal Article. Subjects: Molecular Biology and Genetics; Genetics and Genomics. 9170 words.

Abstract

Comparative transcriptomics can now be conducted on organisms in natural settings, which has greatly enhanced understanding of genome–environment...

The Laboratory Genetic Counselor as an Educator

Eric Rosenthal and April L. Studinski Jones.

in Practical Genetic Counseling for the Laboratory

February 2017; p ublished online March 2017 .

Chapter. Subjects: Molecular Biology and Genetics. 7057 words.

The laboratory genetic counselor is commonly called upon to serve as an educational resource within the genetic testing laboratory. This chapter outlines this unique genetic counseling...

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Time-series metagenomic analysis reveals robustness of soil microbiome against chemical disturbance

Hiromi Kato, Hiroshi Mori, Fumito Maruyama, Atsushi Toyoda, Kenshiro Oshima, Ryo Endo, Genki Fuchu, Masatoshi Miyakoshi, Ayumi Dozono, Yoshiyuki Ohtsubo, Yuji Nagata, Masahira Hattori, Asao Fujiyama, Ken Kurokawa and Masataka Tsuda.

in DNA Research

December 2015; p ublished online October 2015 .

Journal Article. Subjects: Molecular Biology and Genetics; Genetics and Genomics. 9664 words.

Soil microbial communities have great potential for bioremediation of recalcitrant aromatic compounds. However, it is unclear which taxa and genes in the communities, and how they...

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Design and Experimental Application of a Novel Non-Degenerate Universal Primer Set that Amplifies Prokaryotic 16S rRNA Genes with a Low Possibility to Amplify Eukaryotic rRNA Genes

Hiroshi Mori, Fumito Maruyama, Hiromi Kato, Atsushi Toyoda, Ayumi Dozono, Yoshiyuki Ohtsubo, Yuji Nagata, Asao Fujiyama, Masataka Tsuda and Ken Kurokawa.

in DNA Research

April 2014; p ublished online November 2013 .

Journal Article. Subjects: Molecular Biology and Genetics; Genetics and Genomics. 5829 words.

The deep sequencing of 16S rRNA genes amplified by universal primers has revolutionized our understanding of microbial communities by allowing the characterization of the diversity of the...

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Solution Hybrid Selection Capture for the Recovery of Functional Full-Length Eukaryotic cDNAs From Complex Environmental Samples

Claudia Bragalini, Céline Ribière, Nicolas Parisot, Laurent Vallon, Elsa Prudent, Eric Peyretaillade, Mariangela Girlanda, Pierre Peyret, Roland Marmeisse and Patricia Luis.

in DNA Research

December 2014; p ublished online October 2014 .

Journal Article. Subjects: Molecular Biology and Genetics; Genetics and Genomics. 5514 words.

Eukaryotic microbial communities play key functional roles in soil biology and potentially represent a rich source of natural products including biocatalysts. Culture-independent molecular...

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Sma3s: A Three-Step Modular Annotator for Large Sequence Datasets

Antonio Muñoz-Mérida, Enrique Viguera, M. Gonzalo Claros, Oswaldo Trelles and Antonio J. Pérez-Pulido.

in DNA Research

August 2014; p ublished online February 2014 .

Journal Article. Subjects: Molecular Biology and Genetics; Genetics and Genomics. 7137 words.

Automatic sequence annotation is an essential component of modern ‘omics’ studies, which aim to extract information from large collections of sequence data. Most existing tools use sequence...

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MetaVelvet-SL: an extension of the Velvet assembler to a de novo metagenomic assembler utilizing supervised learning

Afiahayati, Kengo Sato and Yasubumi Sakakibara.

in DNA Research

February 2015; p ublished online November 2014 .

Journal Article. Subjects: Molecular Biology and Genetics; Genetics and Genomics. 6296 words.

The assembly of multiple genomes from mixed sequence reads is a bottleneck in metagenomic analysis. A single-genome assembly program (assembler) is not capable of resolving metagenome...

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Captured metagenomics: large-scale targeting of genes based on ‘sequence capture’ reveals functional diversity in soils

Lokeshwaran Manoharan, Sandeep K. Kushwaha, Katarina Hedlund and Dag Ahrén.

in DNA Research

December 2015; p ublished online October 2015 .

Journal Article. Subjects: Molecular Biology and Genetics; Genetics and Genomics. 7508 words.

Microbial enzyme diversity is a key to understand many ecosystem processes. Whole metagenome sequencing (WMG) obtains information on functional genes, but it is costly and inefficient due...

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A Genetic Risk Variant for Myocardial Infarction on Chromosome 6p24 Is Associated With Impaired Central Hemodynamic Indexes

Riyaz S. Patel, Alanna A. Morris, Yusuf Ahmed, Nino Kavtaradze, Salman Sher, Shaoyong Su, A. Maziar Zafari, Rebecca Din-Dzietham, Salina P. Waddy, Viola Vaccarino, R. Wayne Alexander, Gary Gibbons and Arshed A. Quyyumi.

in American Journal of Hypertension

July 2012; p ublished online July 2012 .

Journal Article. Subjects: Genetics and Genomics; Molecular Biology and Genetics. 4563 words.

Background

Genome-wide association studies (GWAS) have identified novel variants associated with myocardial infarction (MI) in Caucasians. We hypothesized...

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Public health activities for mitigation of radiation exposures and risk communication challenges after the Fukushima nuclear accident

Tsutomu Shimura, Ichiro Yamaguchi, Hiroshi Terada, Erik Robert Svendsen and Naoki Kunugita.

in Journal of Radiation Research

May 2015; p ublished online April 2015 .

Journal Article. Subjects: Clinical Genetics; Molecular Biology and Genetics; Epidemiology; Radiology; Nuclear Chemistry, Photochemistry, and Radiation. 5528 words.

Herein we summarize the public health actions taken to mitigate exposure of the public to radiation after the Fukushima accident that occurred on 11 March 2011 in order to record valuable...

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Bugs in the program: can pregnancy drugs and smoking disturb molecular reprogramming of the fetal germline, increasing heritable risk for autism and neurodevelopmental disorders?

Jill Escher.

in Environmental Epigenetics

P ublished online April 2018 .

Journal Article. Subjects: Molecular Biology and Genetics; Biological Sciences; Developmental Biology; Evolutionary Biology; Genetics and Genomics. 4239 words.

Abstract

In a seeming paradox, the prevalence of autism spectrum disorder (ASD) has surged, while at the same time research has pointed to the strong...

Educational outcomes of a medical physicist program over the past 10 years in Japan

Noriyuki Kadoya, Kumiko Karasawa, Iori Sumida, Hidetaka Arimura, Yasumasa Kakinohana, Shigeto Kabuki, Hajime Monzen, Teiji Nishio, Hiroki Shirato and Syogo Yamada.

in Journal of Radiation Research

September 2017; p ublished online April 2017 .

Journal Article. Subjects: Clinical Genetics; Molecular Biology and Genetics; Epidemiology; Radiology; Nuclear Chemistry, Photochemistry, and Radiation. 2780 words.

Abstract

The promotion plan for the Platform of Human Resource Development for Cancer (Ganpro) was initiated by the Ministry of Education, Culture, Sports,...

Does cross-generational epigenetic inheritance contribute to cultural continuity?

Marcus E Pembrey.

in Environmental Epigenetics

P ublished online April 2018 .

Journal Article. Subjects: Molecular Biology and Genetics; Biological Sciences; Developmental Biology; Evolutionary Biology; Genetics and Genomics. 6954 words.

Abstract

Human studies of cross-generational epigenetic inheritance have to consider confounding by social patterning down the generations, often referred to...

Radiotherapy for laryngeal cancer—technical aspects and alternate fractionation

Hideya Yamazaki, Gen Suzuki, Satoaki Nakamura, Ken Yoshida, Koji Konishi, Teruki Teshima and Kazuhiko Ogawa.

in Journal of Radiation Research

July 2017; p ublished online May 2017 .

Journal Article. Subjects: Clinical Genetics; Molecular Biology and Genetics; Epidemiology; Radiology; Nuclear Chemistry, Photochemistry, and Radiation. 8557 words.

Abstract

Early laryngeal, especially glottic, cancer is a good candidate for radiotherapy because obvious early symptoms (e.g. hoarseness) make earlier...

Mycoplasma pneumoniae 23S rRNA Gene Mutations and Mechanisms of Macrolide Resistance

Yun Ye, Suliang Li, Yajun Li, Tianshun Ren and Kaige Liu.

in Laboratory Medicine

February 2013; p ublished online September 2015 .

Journal Article. Subjects: Clinical Cytogenetics and Molecular Genetics; Medical Microbiology and Virology; Microbiology; Molecular and Cell Biology; Molecular Biology and Genetics. 2680 words.

Objective

Resistant strains of Mycoplasma pneumoniae lead to antibiotic inefficacy. The relationship between M pneumoniae 23S rRNA (GenBank: X68422.1) gene...

SeedStor: A Germplasm Information Management System and Public Database

RSP Horler, AS Turner, P Fretter and M Ambrose.

in Plant and Cell Physiology

January 2018; p ublished online December 2017 .

Journal Article. Subjects: Molecular Biology and Genetics; Biotechnology; Biochemistry; Bioinformatics and Computational Biology; Molecular and Cell Biology; Plant Sciences and Forestry; Plant Physiology. 4231 words.

Abstract

SeedStor (https://www.seedstor.ac.uk) acts as the publicly available database for the seed collections held by the Germplasm Resources Unit (GRU)...

Commonalities and Differences in Controlling Multipartite Intracellular Infections of Legume Roots by Symbiotic Microbes

Beatrice Lace and Thomas Ott.

in Plant and Cell Physiology

April 2018; p ublished online February 2018 .

Journal Article. Subjects: Molecular Biology and Genetics; Biotechnology; Biochemistry; Bioinformatics and Computational Biology; Molecular and Cell Biology; Plant Sciences and Forestry; Plant Physiology. 9994 words.

Abstract

Legumes have the almost unique ability to establish symbiotic associations with rhizobia and arbuscular mycorrhizal fungi. Forward and reverse...