Oxford Index Search Results

You are looking at 1-20 of 115 items for:

decision-making x Biological Sciences x Bioinformatics and Computational Biology x clear all

Workshop on using natural language processing applications for enhancing clinical decision making: an executive summary

Vinay M Pai, Mary Rodgers, Richard Conroy, James Luo, Ruixia Zhou and Belinda Seto.

in Journal of the American Medical Informatics Association

February 2014; p ublished online August 2013 .

Journal Article. Subjects: Medical Statistics and Methodology; Bioinformatics and Computational Biology; Biomathematics and Statistics. 2889 words.

Abstract

In April 2012, the National Institutes of Health organized a two-day workshop entitled ‘Natural Language Processing: State of the Art, Future...

Use of population health data to refine diagnostic decision-making for pertussis

Andrew M Fine, Ben Y Reis, Lise E Nigrovic, Donald A Goldmann, Tracy N LaPorte, Karen L Olson and Kenneth D Mandl.

in Journal of the American Medical Informatics Association

January 2010; p ublished online January 2010 .

Journal Article. Subjects: Medical Statistics and Methodology; Bioinformatics and Computational Biology; Biomathematics and Statistics. 4645 words.

Abstract

Objective To improve identification of pertussis cases by developing a decision model that incorporates recent, local, population-level...

Making decisions for structural genomics

Ana Rodrigues and Roderick E. Hubbard.

in Briefings in Bioinformatics

June 2003; p ublished online June 2003 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 0 words.

A large number of structural genomics programmes have been established worldwide with the common aim of large-scale, high-throughput protein structure determination. Due to the considerable...

Go to »  abstract

Variability in adolescent portal privacy features: how the unique privacy needs of the adolescent patient create a complex decision-making process

Marianne Sharko, Lauren Wilcox, Matthew K Hong and Jessica S Ancker.

in Journal of the American Medical Informatics Association

August 2018; p ublished online May 2018 .

Journal Article. Subjects: Medical Statistics and Methodology; Bioinformatics and Computational Biology; Biomathematics and Statistics. 7063 words.

Abstract

Objective

Medical privacy policies, which are clear-cut for adults and young children, become ambiguous...

Go to »  full text: open access

A Randomized Effectiveness Trial of a Clinical Informatics Consult Service: Impact on Evidence-based Decision-making and Knowledge Implementation

Shelagh A. Mulvaney, Leonard Bickman, Nunzia B. Giuse, E. Warren Lambert, Nila A. Sathe and Rebecca N. Jerome.

in Journal of the American Medical Informatics Association

March 2008; p ublished online March 2008 .

Journal Article. Subjects: Medical Statistics and Methodology; Bioinformatics and Computational Biology; Biomathematics and Statistics. 7370 words.

Abstract

Objective: To determine the effectiveness of providing synthesized research evidence to inform patient care practices via an evidence...

Innovative approaches to support patient decision making, improve safety, and enable large-scale clinical research

Lucila Ohno-Machado.

in Journal of the American Medical Informatics Association

December 2011; p ublished online December 2011 .

Journal Article. Subjects: Medical Statistics and Methodology; Bioinformatics and Computational Biology; Biomathematics and Statistics. 884 words.

Can Cognitive Biases during Consumer Health Information Searches Be Reduced to Improve Decision Making?

Annie Y.S. Lau and Enrico W. Coiera.

in Journal of the American Medical Informatics Association

January 2009; p ublished online January 2009 .

Journal Article. Subjects: Medical Statistics and Methodology; Bioinformatics and Computational Biology; Biomathematics and Statistics. 8643 words.

Abstract

Objective: To test whether the anchoring and order cognitive biases experienced during search by consumers using information retrieval...

Measuring the Impact of Diagnostic Decision Support on the Quality of Clinical Decision Making: Development of a Reliable and Valid Composite Score

Padmanabhan Ramnarayan, Ritika R. Kapoor, Michael Coren, Vasantha Nanduri, Amanda L. Tomlinson, Paul M. Taylor, Jeremy C. Wyatt and Joseph F. Britto.

in Journal of the American Medical Informatics Association

November 2003; p ublished online November 2003 .

Journal Article. Subjects: Medical Statistics and Methodology; Bioinformatics and Computational Biology; Biomathematics and Statistics. 6568 words.

Abstract

Objective: Few previous studies evaluating the benefits of diagnostic decision support systems have simultaneously measured changes in...

Effects of a Computerized System to Support Shared Decision Making in Symptom Management of Cancer Patients: Preliminary Results

Cornelia M. Ruland, Thomas White, Marguerite Stevens, Gilbert Fanciullo and Samir M. Khilani.

in Journal of the American Medical Informatics Association

November 2003; p ublished online November 2003 .

Journal Article. Subjects: Medical Statistics and Methodology; Bioinformatics and Computational Biology; Biomathematics and Statistics. 5045 words.

Abstract

Objective: (1) To evaluate preliminary effects of a computerized support system on congruence between patients' reported symptoms and...

Ten Commandments for Effective Clinical Decision Support: Making the Practice of Evidence-based Medicine a Reality

David W. Bates, Gilad J. Kuperman, Samuel Wang, Tejal Gandhi, Anne Kittler, Lynn Volk, Cynthia Spurr, Ramin Khorasani, Milenko Tanasijevic and Blackford Middleton.

in Journal of the American Medical Informatics Association

November 2003; p ublished online November 2003 .

Journal Article. Subjects: Medical Statistics and Methodology; Bioinformatics and Computational Biology; Biomathematics and Statistics. 6072 words.

Abstract

While evidence-based medicine has increasingly broad-based support in health care, it remains difficult to get physicians to actually practice it....

Decision-making during NHEJ: a network of interactions in human Polμ implicated in substrate recognition and end-bridging

Maria Jose Martin and Luis Blanco.

in Nucleic Acids Research

July 2014; p ublished online May 2014 .

Journal Article. Subjects: Chemistry; Biochemistry; Bioinformatics and Computational Biology; Genetics and Genomics; Molecular and Cell Biology. 8310 words.

Human Polμ is a DNA polymerase belonging to the X family that has been implicated in the non-homologous end-joining (NHEJ) pathway during repair of double-strand breaks in DNA. Loop1 is a...

Go to »  full text: open access

ToxPi GUI: an interactive visualization tool for transparent integration of data from diverse sources of evidence

David M. Reif, Myroslav Sypa, Eric F. Lock, Fred A. Wright, Ander Wilson, Tommy Cathey, Richard R. Judson and Ivan Rusyn.

in Bioinformatics

February 2013; p ublished online November 2012 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 1202 words.

Motivation: Scientists and regulators are often faced with complex decisions, where use of scarce resources must be prioritized using collections of diverse information. The...

Go to »  abstract

Integrating different data types by regularized unsupervised multiple kernel learning with application to cancer subtype discovery

Nora K. Speicher and Nico Pfeifer.

in Bioinformatics

June 2015; p ublished online June 2015 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 5258 words.

Motivation: Despite ongoing cancer research, available therapies are still limited in quantity and effectiveness, and making treatment decisions for individual patients remains...

Go to »  full text: open access

An XML message broker framework for exchange and integration of microarray data

Donny Tjandra, Stephen Wong, Weimin Shen, Brian Pulliam, Elaine Yu and Laura Esserman.

in Bioinformatics

September 2003; p ublished online September 2003 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 0 words.

Motivation: Microarrays are an important research tool for the advancement of basic biological sciences. However this technology has yet to be integrated with clinical decision...

Go to »  abstract

SemMedDB: a PubMed-scale repository of biomedical semantic predications

Halil Kilicoglu, Dongwook Shin, Marcelo Fiszman, Graciela Rosemblat and Thomas C. Rindflesch.

in Bioinformatics

December 2012; p ublished online October 2012 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 1375 words.

Summary: Effective access to the vast biomedical knowledge present in the scientific literature is challenging. Semantic relations are increasingly used in knowledge management...

Go to »  abstract

rCGH: a comprehensive array-based genomic profile platform for precision medicine

Frederic Commo, Justin Guinney, Charles Ferté, Brian Bot, Celine Lefebvre, Jean-Charles Soria and Fabrice André.

in Bioinformatics

May 2016; p ublished online December 2015 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 1252 words.

Summary: We present rCGH, a comprehensive array-based comparative genomic hybridization analysis workflow, integrating computational improvements and functionalities...

Go to »  full text: open access

SESAME (SEquence Sorter & AMplicon Explorer): genotyping based on high-throughput multiplex amplicon sequencing

Emese Meglécz, Sylvain Piry, Erick Desmarais, Maxime Galan, André Gilles, Emmanuel Guivier, Nicolas Pech and Jean-François Martin.

in Bioinformatics

January 2011; p ublished online November 2010 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 1051 words.

Summary: Characterizing genetic diversity through genotyping short amplicons is central to evolutionary biology. Next-generation sequencing (NGS) technologies changed the scale...

Go to »  full text: open access   » abstract

M@CBETH: a microarray classification benchmarking tool

Nathalie L. M. M. Pochet, Frizo A. L. Janssens, Frank De Smet, Kathleen Marchal, Johan A. K. Suykens and Bart L. R. De Moor.

in Bioinformatics

July 2005; p ublished online May 2005 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 1096 words.

Summary: Microarray classification can be useful to support clinical management decisions for individual patients in, for example, oncology. However, comparing classifiers and...

Go to »  abstract

Fuzzy optimization for detecting enzyme targets of human uric acid metabolism

Kai-Cheng Hsu and Feng-Sheng Wang.

in Bioinformatics

December 2013; p ublished online September 2013 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 5221 words.

Motivation: Mathematical modeling and optimization have been used for detecting enzyme targets in human metabolic disorders. Such optimal drug design methods are generally...

Go to »  abstract

Mining SARS-CoV protease cleavage data using non-orthogonal decision trees: a novel method for decisive template selection

Zheng Rong Yang.

in Bioinformatics

June 2005; p ublished online March 2005 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 5537 words.

Motivation: Although the outbreak of the severe acute respiratory syndrome (SARS) is currently over, it is expected that it will return to attack human beings. A critical...

Go to »  abstract