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Overview page. Subjects: Warfare and Defence — Maritime History.

Of a ship, to sink at sea, generally understood to be by the flooding of its hull either through springing a leak or through striking a rock. Other causes of a ship sinking, such as...

See overview in Oxford Index

Comparison of sequence variants in transcriptomic control regions across 17 mouse genomes

Cao Nguyen, Abdul Baten and Grant Morahan.

in Database

P ublished online March 2014 .

Journal Article. Subjects: Bioinformatics and Computational Biology; Ecology and Conservation; Evolutionary Biology. 3514 words.

The laboratory mouse is the most widely used mammalian model organism in biomedical research, so a thorough annotation of functional variation in the mouse genome would be of significant...

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A novel multi-alignment pipeline for high-throughput sequencing data

Shunping Huang, James Holt, Chia-Yu Kao, Leonard McMillan and Wei Wang.

in Database

P ublished online June 2014 .

Journal Article. Subjects: Bioinformatics and Computational Biology; Ecology and Conservation; Evolutionary Biology. 6617 words.

Mapping reads to a reference sequence is a common step when analyzing allele effects in high-throughput sequencing data. The choice of reference is critical because its effect on...

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Whole-Genome Sequencing of Six Mauritian Cynomolgus Macaques (Macaca fascicularis) Reveals a Genome-Wide Pattern of Polymorphisms under Extreme Population Bottleneck

Naoki Osada, Nilmini Hettiarachchi, Isaac Adeyemi Babarinde, Naruya Saitou and Antoine Blancher.

in Genome Biology and Evolution

P ublished online March 2015 .

Journal Article. Subjects: Bioinformatics and Computational Biology; Evolutionary Biology; Genetics and Genomics. 5845 words.

Cynomolgus macaques (Macaca fascicularis) were introduced to the island of Mauritius by humans around the 16th century. The unique demographic history of the Mauritian cynomolgus macaques...

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Genome-Wide Association Study of Extreme Longevity in Drosophila melanogaster

Molly K. Burke, Elizabeth G. King, Parvin Shahrestani, Michael R. Rose and Anthony D. Long.

in Genome Biology and Evolution

January 2014; p ublished online November 2013 .

Journal Article. Subjects: Bioinformatics and Computational Biology; Evolutionary Biology; Genetics and Genomics. 7384 words.

Human genome-wide association studies (GWAS) of longevity attempt to identify alleles at different frequencies in the extremely old, relative to a younger control sample. Here, we apply a...

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IGVBrowser–a genomic variation resource from diverse Indian populations

Ankita Narang, Rishi Das Roy, Amit Chaurasia, Arijit Mukhopadhyay, Mitali Mukerji and Debasis Dash.

in Database

P ublished online September 2010 .

Journal Article. Subjects: Bioinformatics and Computational Biology; Ecology and Conservation; Evolutionary Biology. 1436 words.

The Indian Genome Variation Consortium (IGVC) project, an initiative of the Council for Scientific and Industrial Research, has been the first large-scale comprehensive study of the Indian...

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Microevolution of a Zoonotic Helicobacter Population Colonizing the Stomach of a Human Host before and after Failed Treatment

Thomas Schott, Pradeep Kumar Kondadi, Marja-Liisa Hänninen and Mirko Rossi.

in Genome Biology and Evolution

January 2012; p ublished online November 2012 .

Journal Article. Subjects: Bioinformatics and Computational Biology; Evolutionary Biology; Genetics and Genomics. 3613 words.

To investigate the microevolution of Helicobacter bizzozeronii in the human stomach, comparative genomics of antrum-derived populations, obtained 3 months before (T 0) and 6...

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