Oxford Index Search Results

You are looking at 1-20 of 3,124 items for:

gene pair x clear all

Refine by subject

 

Refine by type

Refine by product

 

gene pair

Overview page. Subjects: Genetics and Genomics.

In a diploid cell, the two representative genes (either identical or nonidentical alleles) at a given locus on homologous chromosomes.

See overview in Oxford Index

pair-rule gene

Overview page. Subjects: Chemistry.

Any of the eight genes in Drosophila that regulate the segment polarity genes. Examples are hairy, runt, and paired.

See overview in Oxford Index

gene pair

Overview page. Subjects: Genetics and Genomics.

In a diploid cell, the two representative genes (either identical or nonidentical alleles) at a given locus on homologous chromosomes.

See overview in Oxford Index

gene pair

Robert C. King, William D. Stansfield and Pamela K. Mulligan.

in A Dictionary of Genetics

January 2007; p ublished online January 2007 .

Reference Entry. Subjects: Genetics and Genomics. 22 words.

in a diploid cell, the two representative genes (either identical or nonidentical alleles) at a given locus on homologous chromosomes.

Go to Oxford Reference »  home page

gene pair

Robert C. King, Pamela K. Mulligan and William D. Stansfield.

in A Dictionary of Genetics

January 2013; p ublished online January 2014 .

Reference Entry. Subjects: Genetics and Genomics. 22 words.

in a diploid cell, the two representative genes (either identical or nonidentical alleles) at a given locus on homologous chromosomes.

Go to Oxford Reference »  home page

Evolution of Closely Linked Gene Pairs in Vertebrate Genomes

Erik Franck, Tim Hulsen, Martijn A. Huynen, Wilfried W. de Jong, Nicolette H. Lubsen and Ole Madsen.

in Molecular Biology and Evolution

September 2008; p ublished online June 2008 .

Journal Article. Subjects: Evolutionary Biology; Molecular and Cell Biology. 8505 words.

The orientation of closely linked genes in mammalian genomes is not random: there are more head-to-head (h2h) gene pairs than expected. To understand the origin of this enrichment in h2h...

Go to Oxford Journals »  abstract

Coexpression of Linked Gene Pairs Persists Long after Their Separation

Guang-Zhong Wang, Wei-Hua Chen and Martin J. Lercher.

in Genome Biology and Evolution

January 2011; p ublished online July 2011 .

Journal Article. Subjects: Bioinformatics and Computational Biology; Evolutionary Biology; Genetics and Genomics. 3640 words.

In many eukaryotes, physically linked gene pairs tend to be coexpressed. However, it is still controversial to what extent this neighbor coexpression is maintained by selection and to what...

Go to Oxford Journals »  full text: open access

Comparative ab initio prediction of gene structures using pair HMMs

Irmtraud M. Meyer and Richard Durbin.

in Bioinformatics

October 2002; p ublished online October 2002 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 0 words.

We present a novel comparative method for the ab initio prediction of protein coding genes in eukaryotic genomes. The method simultaneously predicts the gene structures of two un-annotated...

Go to Oxford Journals »  abstract

SICAGO: Semi-supervised cluster analysis using semantic distance between gene pairs in Gene Ontology

Bo-Yeong Kang, Song Ko and Dae-Won Kim.

in Bioinformatics

May 2010; p ublished online March 2010 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 1201 words.

Summary: Despite the importance of using the semantic distance to improve the performance of conventional expression-based clustering, there are few freely available software...

Go to Oxford Journals »  abstract

Plastid-LCGbase: a collection of evolutionarily conserved plastid-associated gene pairs

Dapeng Wang and Jun Yu.

in Nucleic Acids Research

January 2015; p ublished online November 2014 .

Journal Article. Subjects: Chemistry; Biochemistry; Bioinformatics and Computational Biology; Genetics and Genomics; Molecular and Cell Biology. 4027 words.

Plastids carry their own genetic material that encodes a variable set of genes that are limited in number but functionally important. Aside from orthology, the lineage-specific order and...

Go to Oxford Journals »  full text: open access

Conservation, Rearrangement, and Deletion of Gene Pairs During the Evolution of Four Grass Genomes

Nicholas Krom and Wusirika Ramakrishna.

in DNA Research

December 2010; p ublished online September 2010 .

Journal Article. Subjects: Genetics and Genomics. 5483 words.

Gene order and content differ among homologous regions of closely related genomes. Similarities in the expression profiles of physically adjacent genes suggest that the proper functioning...

Go to Oxford Journals »  full text: open access   » abstract

Using shared genomic synteny and shared protein functions to enhance the identification of orthologous gene pairs

Xiangqun H. Zheng, Fu Lu, Zhen-Yuan Wang, Fei Zhong, Jeffrey Hoover and Richard Mural.

in Bioinformatics

March 2005; p ublished online September 2004 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 6375 words.

Motivation: The identification of orthologous gene pairs is generally based on sequence similarity. Gene pairs that are mutually ‘best hits’ between the genomes being compared...

Go to Oxford Journals »  abstract

Patterns of Nucleotide Substitution Among Simultaneously Duplicated Gene Pairs in <i>Arabidopsis thaliana</i>

Liqing Zhang, Todd J. Vision and Brandon S. Gaut.

in Molecular Biology and Evolution

September 2002; p ublished online September 2002 .

Journal Article. Subjects: Evolutionary Biology; Molecular and Cell Biology. 7471 words.

We characterized rates and patterns of synonymous and nonsynonymous substitution in 242 duplicated gene pairs on chromosomes 2 and 4 of Arabidopsis thaliana. Based on their collinear order...

Go to Oxford Journals »  abstract

Cooperative gene regulation by microRNA pairs and their identification using a computational workflow

Ulf Schmitz, Xin Lai, Felix Winter, Olaf Wolkenhauer, Julio Vera and Shailendra K. Gupta.

in Nucleic Acids Research

July 2014; p ublished online May 2014 .

Journal Article. Subjects: Chemistry; Biochemistry; Bioinformatics and Computational Biology; Genetics and Genomics; Molecular and Cell Biology. 11388 words.

MicroRNAs (miRNAs) are an integral part of gene regulation at the post-transcriptional level. Recently, it has been shown that pairs of miRNAs can repress the translation of a target mRNA...

Go to Oxford Journals »  full text: open access

Sensitive gene fusion detection using ambiguously mapping RNA-Seq read pairs

Marcus Kinsella, Olivier Harismendy, Masakazu Nakano, Kelly A. Frazer and Vineet Bafna.

in Bioinformatics

April 2011; p ublished online February 2011 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 6002 words.

Motivation: Paired-end whole transcriptome sequencing provides evidence for fusion transcripts. However, due to the repetitiveness of the transcriptome, many reads have...

Go to Oxford Journals »  abstract

Cigarette smoke-induced differential gene expression in blood cells from monozygotic twin pairs

Danitsja M.van Leeuwen, Ebienus van Agen, Ralph W.H. Gottschalk, Robert Vlietinck, Marij Gielen, Marcel H.M.van Herwijnen, Lou M. Maas, Jos C.S. Kleinjans and Joost H.M.van Delft.

in Carcinogenesis

October 2006; p ublished online March 2007 .

Journal Article. Subjects: Clinical Cytogenetics and Molecular Genetics. 5420 words.

Chemical carcinogenesis induced by lifestyle factors like cigarette smoking is a major research area in molecular epidemiology. Gene expression analysis of large numbers of genes...

Go to Oxford Journals »  abstract

Functional Analysis of Paired Box Missense Mutations in The <i>PAX6</i> Gene

Hank Kejun Tang, Lian-Yu Chao and Grady F. Saunders.

in Human Molecular Genetics

March 1997; p ublished online March 1997 .

Journal Article. Subjects: Genetics and Genomics. 4552 words.

Mutations in the human PAX6 gene produce various phenotypes, including aniridia, Peters' anomaly, autosomal dominant keratitis and familial foveal dysplasia. The various phenotypes may...

Go to Oxford Journals »  home page

Efficient implementation of a generalized pair hidden Markov model for comparative gene finding

W. H. Majoros, M. Pertea and S. L. Salzberg.

in Bioinformatics

May 2005; p ublished online February 2005 .

Journal Article. Subjects: Bioinformatics and Computational Biology. 6264 words.

Motivation: The increased availability of genome sequences of closely related organisms has generated much interest in utilizing homology to improve the accuracy of gene...

Go to Oxford Journals »  abstract

A Two-Stage Genome Scan for Schizophrenia Susceptibility Genes in 196 Affected Sibling Pairs

N. M. Williams, M. I. Rees, P. Holmans, N. Norton, A. G. Cardno, L. A. Jones, K. C. Murphy, R. D. Sanders, G. McCarthy, M. Y. Gray, I. Fenton, P. McGuffin and M. J. Owen.

in Human Molecular Genetics

September 1999; p ublished online September 1999 .

Journal Article. Subjects: Genetics and Genomics. 6607 words.

We undertook a systematic search for linkage in 196 affected sibling pairs (ASPs) with DSMIV schizophrenia. In stage 1 we typed 97ASPs with 229 microsatellite markers at an average...

Go to Oxford Journals »  abstract

pair rule genes

Robert C. King, William D. Stansfield and Pamela K. Mulligan.

in A Dictionary of Genetics

January 2007; p ublished online January 2007 .

Reference Entry. Subjects: Genetics and Genomics. 7 words.

Go to Oxford Reference »  home page

pair rule genes

Robert C. King, Pamela K. Mulligan and William D. Stansfield.

in A Dictionary of Genetics

January 2013; p ublished online January 2014 .

Reference Entry. Subjects: Genetics and Genomics. 7 words.

Go to Oxford Reference »  home page